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SRX26426218: Whole-genome sequencing of pathogens from a hospital setting
1 ILLUMINA (Illumina NovaSeq 6000) run: 1.1M spots, 599.9M bases, 334.6Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN44347788 • SRS22945603 • All experiments • All runs
Organism: Clostridioides difficile
Library:
Name: BWH-CDIFF-0000-0098-0388
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.1M spots, 599.9M bases, 334.6Mb
Run# of Spots# of BasesSizePublished
SRR310409111,073,428599.9M334.6Mb2024-10-18

ID:
35688511

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